BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026C03SP1|AL428513
(844 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1756 1665 0.0
>3x_Contig1756
Length = 16846
Score = 1665 bits (838), Expect = 0.0
Identities = 841/844 (99%)
Strand = Plus / Minus
Query: 1 gatcttcttccacccatggaccatttaaagtaataattaactctcctgtcgaaaccgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4055 gatcttcttccacccatggaccatttaaagtaataattaactctcctgtcgaaaccgaaa 3996
Query: 61 ttttttcaaaaacaattctagggaacttgtgcccaacggaagtgacttcttctccaagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3995 ttttttcaaaaacaattctagggaacttgtgcccaacggaagtgacttcttctccaagat 3936
Query: 121 tgtttaaactcacctcttcaaatagatcatgcggtgaatcttcgttatgcattctcacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3935 tgtttaaactcacctcttcaaatagatcatgcggtgaatcttcgttatgcattctcacac 3876
Query: 181 ccgaaatccattgtagttgatctatattgttgtcagctttccattggcgtagtccggatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3875 ccgaaatccattgtagttgatctatattgttgtcagctttccattggcgtagtccggatt 3816
Query: 241 ttgtaacaaaggtttccttcggaatttctatatttgtgtaccggggatctactatattaw 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3815 ttgtaacaaaggtttccttcggaatttctatatttgtgtaccggggatctactatattat 3756
Query: 301 ttwcaggttctgatctaaaagtgtcgtaatcataatctggtagcttctccggcagctctt 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3755 tttcaggttctgatctaaaagtgtcgtaatcataatctggtagcttctccggcagctctt 3696
Query: 361 tgccacattcgtagtgaactttgtcgtaaaccatatcgggtactggccatagtcttaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3695 tgccacattcgtagtgaactttgtcgtaaaccatatcgggtactggccatagtcttaaat 3636
Query: 421 cgcaatctttggaccaagtaaccaattggaattctctgtcatcaatgatggtattttgac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3635 cgcaatctttggaccaagtaaccaattggaattctctgtcatcaatgatggtattttgac 3576
Query: 481 tgtgcctcgatctccataagaagtccgtgactctatctgtatgccccttgaaaacgtacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3575 tgtgcctcgatctccataagaagtccgtgactctatctgtatgccccttgaaaacgtacg 3516
Query: 541 ttggctgtagtttggtagtccttgactcagaattgcctgagtcatgaaaagagttcgcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3515 ttggctgtagtttggtagtccttgactcagaattgcctgagtcatgaaaagagttcgcca 3456
Query: 601 aatatacagaattatttcctcctatcatcggcatgatgcaatatccgtccccaaacggga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3455 aatatacagaattatttcctcctatcatcggcatgatgcaatatccgtccccaaacggga 3396
Query: 661 gatatcgtcctctccacacaggaaactctgtggtaattgtcatctgtagttcatcttcaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3395 gatatcgtcctctccacacaggaaactctgtggtaattgtcatctgtagttcatcttcaa 3336
Query: 721 ctttattataatcccagaactttaccgttccgtcattcccacttgacatgatttcggttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3335 ctttattataatcccagaactttaccgttccgtcattcccacttgacatgatttcggttt 3276
Query: 781 cgttgaatggattgawgtcgatgctattaacgcttccgctatgaccttctaatacagata 840
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3275 cgttgaatggattgaagtcgatgctattaacgcttccgctatgaccttctaatacagata 3216
Query: 841 acgg 844
||||
Sbjct: 3215 acgg 3212
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5397
Number of Sequences: 1807
Number of extensions: 5397
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 844
length of database: 10,358,551
effective HSP length: 16
effective length of query: 828
effective length of database: 10,329,639
effective search space: 8552941092
effective search space used: 8552941092
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)